BioASQ Participants Area
Task 14b: Test Results of Phase B
The test results are presented in separate tables for each type of annotation. The "System Description" of each system is used.The evaluation measures that are used in Task B are presented here .
Warning: For ideal answers, good ROUGE results do not always imply good manual scores.
Test batch 1
Exact Answers
| Yes/No | Factoid | List | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| System | Accuracy | F1 Yes | F1 No | Macro F1 | Strict Acc. | Lenient Acc. | MRR | Mean Prec. | Recall | F-Measure |
| CS 1st submit | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.6522 | 0.7826 | 0.7065 | 0.4813 | 0.4222 | 0.4416 |
| "RMC_1" | 0.8235 | 0.8421 | 0.8000 | 0.8211 | 0.3043 | 0.3043 | 0.3043 | 0.2984 | 0.2112 | 0.2240 |
| asmalltrialsystem | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.4348 | 0.5652 | 0.5000 | 0.4418 | 0.4012 | 0.4058 |
| ossllm | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.4348 | 0.5652 | 0.5000 | 0.4418 | 0.4012 | 0.4058 |
| Biomedical QA system | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.3478 | 0.3478 | 0.3478 | 0.4306 | 0.4300 | 0.4127 |
| Biomedical QA s. v2 | 0.8824 | 0.9000 | 0.8571 | 0.8786 | 0.2609 | 0.3043 | 0.2826 | 0.1242 | 0.5185 | 0.1870 |
| Biomedical QA s3 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.3478 | 0.3478 | 0.3478 | 0.4094 | 0.4420 | 0.4109 |
| Biomedical QA s.4 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.3478 | 0.3478 | 0.3478 | 0.3963 | 0.4289 | 0.3983 |
| WM Licensing Oracle | 0.8824 | 0.9091 | 0.8333 | 0.8712 | 0.3478 | 0.3478 | 0.3478 | 0.3760 | 0.3974 | 0.3602 |
| RMC_2 | 0.8824 | 0.9000 | 0.8571 | 0.8786 | 0.5217 | 0.5217 | 0.5217 | 0.3240 | 0.2952 | 0.2910 |
| pancras_naive | 0.9412 | 0.9474 | 0.9333 | 0.9404 | 0.5652 | 0.6522 | 0.6014 | 0.4004 | 0.4123 | 0.3931 |
| pancras_crag | 0.9412 | 0.9474 | 0.9333 | 0.9404 | 0.5652 | 0.6522 | 0.6014 | 0.4004 | 0.4123 | 0.3931 |
| DMISTeam3 | 0.9412 | 0.9474 | 0.9333 | 0.9404 | 0.6087 | 0.6522 | 0.6174 | 0.3046 | 0.4090 | 0.3147 |
| h-nlp-autob-medcpt | 0.9412 | 0.9474 | 0.9333 | 0.9404 | 0.3478 | 0.3478 | 0.3478 | 0.5698 | 0.2785 | 0.3496 |
| health-nlp-4 | 0.8235 | 0.8421 | 0.8000 | 0.8211 | - | - | - | 0.0754 | 0.0497 | 0.0569 |
| health-nlp-3 | 0.8824 | 0.9000 | 0.8571 | 0.8786 | 0.5652 | 0.5652 | 0.5652 | 0.3187 | 0.1838 | 0.2078 |
| health-nlp-2 | 0.7647 | 0.8333 | 0.6000 | 0.7167 | 0.3913 | 0.3913 | 0.3913 | 0.2515 | 0.2048 | 0.2037 |
| health-nlp-1 | 0.5882 | 0.6667 | 0.4615 | 0.5641 | 0.1304 | 0.1304 | 0.1304 | 0.2406 | 0.0930 | 0.1115 |
| ubuntu | 0.8824 | 0.8889 | 0.8750 | 0.8819 | 0.4348 | 0.4348 | 0.4348 | 0.2926 | 0.1925 | 0.2099 |
| MedQA-1 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.7826 | 0.8261 | 0.7935 | 0.4486 | 0.4521 | 0.4397 |
| MedQA-2 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.7826 | 0.8261 | 0.7935 | 0.4635 | 0.4678 | 0.4503 |
| MedQA-3 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.7826 | 0.8261 | 0.7935 | 0.4567 | 0.4460 | 0.4408 |
| MedQA-4 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.6087 | 0.7826 | 0.6754 | 0.3445 | 0.4489 | 0.3814 |
| MedQA-5 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.7826 | 0.8261 | 0.7935 | 0.4567 | 0.4460 | 0.4408 |
| Organization name | 0.9412 | 0.9474 | 0.9333 | 0.9404 | 0.4348 | 0.4348 | 0.4348 | 0.5173 | 0.4029 | 0.4164 |
| CSA-IISR 1st | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.6522 | 0.7826 | 0.7065 | 0.4813 | 0.4222 | 0.4416 |
| CSA-IISR 2nd | 0.8824 | 0.9000 | 0.8571 | 0.8786 | 0.8261 | 0.8261 | 0.8261 | 0.4838 | 0.4074 | 0.4280 |
| CSA-IISR 3rd | 0.8824 | 0.9000 | 0.8571 | 0.8786 | 0.6957 | 0.8261 | 0.7500 | 0.4798 | 0.4357 | 0.4470 |
| DS@GT-BioASQ | 0.7647 | 0.8000 | 0.7143 | 0.7571 | 0.3913 | 0.3913 | 0.3913 | 0.5778 | 0.3013 | 0.3559 |
| dmiip2024 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6087 | 0.7826 | 0.6826 | 0.5167 | 0.3139 | 0.3582 |
| dmiip2024_1 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.5652 | 0.6957 | 0.6159 | 0.4505 | 0.3579 | 0.3812 |
| dmiip2024_2 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6522 | 0.6957 | 0.6739 | 0.4857 | 0.3660 | 0.3879 |
| dmiip2024_4 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.6087 | 0.6522 | 0.6304 | 0.5254 | 0.3382 | 0.3854 |
| dmiip2024_3 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.5217 | 0.6087 | 0.5543 | 0.4344 | 0.4002 | 0.3746 |
| porties-llama3-base | 0.8824 | 0.9091 | 0.8333 | 0.8712 | 0.3913 | 0.4783 | 0.4087 | 0.3351 | 0.3702 | 0.3359 |
| dictycite-baseline | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.6522 | 0.6522 | 0.6522 | 0.4698 | 0.3385 | 0.3752 |
| DMIS_MES_TEST_1 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.5652 | 0.6957 | 0.6159 | 0.4567 | 0.3144 | 0.3413 |
| DMIS_MES_TEST_2 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.5652 | 0.6957 | 0.6087 | 0.4587 | 0.3176 | 0.3447 |
| DMIS_MES_TEST_3 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.5652 | 0.6957 | 0.6087 | 0.4567 | 0.3144 | 0.3413 |
| IR_Y-1 | 0.6471 | 0.7692 | 0.2500 | 0.5096 | 0.0000 | 0.1739 | 0.0630 | 0.2237 | 0.1981 | 0.2014 |
| DMIS_MES_TEST_4 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.5652 | 0.6957 | 0.6087 | 0.4567 | 0.3144 | 0.3413 |
| DMIS_MES_TEST_5 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.5652 | 0.6957 | 0.6159 | 0.4567 | 0.3144 | 0.3413 |
| IR_J-1 | 0.8824 | 0.9091 | 0.8333 | 0.8712 | 0.6522 | 0.6522 | 0.6522 | 0.4633 | 0.3113 | 0.3533 |
| IR_J-2 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6087 | 0.6957 | 0.6413 | 0.3435 | 0.3501 | 0.3071 |
| IR_J-3 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.6522 | 0.7826 | 0.7065 | 0.3940 | 0.2984 | 0.3119 |
| IR_J-4 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6087 | 0.6957 | 0.6449 | 0.3278 | 0.4022 | 0.3393 |
| IR_J-5 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.6087 | 0.6522 | 0.6304 | 0.3662 | 0.4934 | 0.3949 |
| IR_Y-2 | 0.6471 | 0.7692 | 0.2500 | 0.5096 | 0.0000 | 0.1304 | 0.0413 | 0.2073 | 0.2170 | 0.2034 |
| IR_Y-3 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.3043 | 0.3478 | 0.3261 | 0.2240 | 0.1788 | 0.1820 |
| IR_Y-5 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.5217 | 0.6087 | 0.5652 | 0.2223 | 0.1761 | 0.1824 |
| EP-1 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.6522 | 0.6522 | 0.6522 | 0.4952 | 0.3274 | 0.3790 |
| IR_Y-4 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.3478 | 0.4348 | 0.3804 | 0.2002 | 0.1757 | 0.1764 |
| EP-2 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.6957 | 0.7391 | 0.7174 | 0.5365 | 0.3286 | 0.3856 |
| config-1 | 0.8824 | 0.9000 | 0.8571 | 0.8786 | 0.6522 | 0.7391 | 0.6848 | 0.4818 | 0.5049 | 0.4803 |
| config-2 | 0.9412 | 0.9474 | 0.9333 | 0.9404 | 0.7391 | 0.8696 | 0.7841 | 0.3906 | 0.5153 | 0.4208 |
| EP-3 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.6522 | 0.7391 | 0.6848 | 0.4982 | 0.4033 | 0.4159 |
| EP-4 | 0.9412 | 0.9474 | 0.9333 | 0.9404 | 0.5217 | 0.6522 | 0.5870 | 0.4671 | 0.3186 | 0.3619 |
| Fleming-1 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.5217 | 0.7391 | 0.6087 | 0.3832 | 0.3965 | 0.3712 |
| EP-5 | 0.9412 | 0.9474 | 0.9333 | 0.9404 | 0.5217 | 0.6087 | 0.5652 | 0.4413 | 0.3241 | 0.3449 |
| ku_dmis | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.5652 | 0.6087 | 0.5870 | 0.4850 | 0.3853 | 0.4113 |
| UR-IW-1 | 0.8824 | 0.9000 | 0.8571 | 0.8786 | 0.6087 | 0.7391 | 0.6739 | 0.3014 | 0.5659 | 0.3637 |
| UR-IW-2 | 0.8824 | 0.9000 | 0.8571 | 0.8786 | 0.5217 | 0.6522 | 0.5667 | 0.3368 | 0.5052 | 0.3829 |
| UR-IW-3 | 0.8824 | 0.9000 | 0.8571 | 0.8786 | 0.6522 | 0.7391 | 0.6848 | 0.3303 | 0.5070 | 0.3624 |
| UR-IW-4 | 0.8824 | 0.9000 | 0.8571 | 0.8786 | 0.5217 | 0.6957 | 0.6087 | 0.4020 | 0.4777 | 0.4058 |
| UR-IW-5 | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.4348 | 0.5652 | 0.4870 | 0.3151 | 0.5637 | 0.3675 |
| bioinfo-0 | 0.8824 | 0.9000 | 0.8571 | 0.8786 | 0.6087 | 0.7391 | 0.6609 | 0.3805 | 0.4698 | 0.3997 |
| CSA-IISR 4th | 0.8824 | 0.9000 | 0.8571 | 0.8786 | 0.6087 | 0.7391 | 0.6536 | 0.4649 | 0.4198 | 0.4332 |
| CSA-IISR 5st | 0.8824 | 0.8889 | 0.8750 | 0.8819 | 0.6087 | 0.7391 | 0.6522 | 0.4814 | 0.4074 | 0.4273 |
| Dif-C | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.6087 | 0.6522 | 0.6232 | 0.4769 | 0.3811 | 0.4037 |
| Bio26NIA | 0.9412 | 0.9524 | 0.9231 | 0.9377 | 0.6087 | 0.6522 | 0.6304 | 0.4622 | 0.4865 | 0.4551 |
| Another | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6087 | 0.6087 | 0.6087 | 0.4930 | 0.3498 | 0.3820 |
| bioinfo-1 | 0.8824 | 0.9000 | 0.8571 | 0.8786 | 0.6522 | 0.7391 | 0.6957 | 0.3712 | 0.4689 | 0.3949 |
| BioASQ_Baseline | 0.3529 | 0.2667 | 0.4211 | 0.3439 | 0.0435 | 0.2174 | 0.0993 | 0.1102 | 0.1787 | 0.1185 |
Ideal Answers
| Automatic scores (Rouge - R) | Manual scores | |||||||
|---|---|---|---|---|---|---|---|---|
| System | R-2 (Rec) | R-2 (F1) | R-SU4 (Rec) | R-SU4 (F1) | Readability | Recall | Precision | Repetition |
| CS 1st submit | 0.2429 | 0.2556 | 0.2348 | 0.2466 | 4.53 | 4.40 | 4.50 | 4.80 |
| "RMC_1" | 0.1775 | 0.2150 | 0.1689 | 0.2052 | 4.56 | 3.64 | 4.34 | 4.85 |
| asmalltrialsystem | 0.3046 | 0.2057 | 0.3089 | 0.2058 | 4.41 | 4.58 | 4.03 | 4.38 |
| ossllm | 0.3046 | 0.2057 | 0.3089 | 0.2058 | 4.41 | 4.58 | 4.03 | 4.38 |
| Biomedical QA system | 0.2830 | 0.1587 | 0.2946 | 0.1618 | 4.51 | 4.60 | 3.73 | 4.81 |
| Biomedical QA s. v2 | 0.2996 | 0.1511 | 0.3120 | 0.1548 | 4.56 | 4.65 | 3.71 | 4.76 |
| Biomedical QA s3 | 0.2874 | 0.1630 | 0.2974 | 0.1643 | 4.36 | 4.63 | 3.75 | 4.79 |
| Biomedical QA s.4 | 0.2875 | 0.1621 | 0.3003 | 0.1648 | 4.40 | 4.68 | 3.81 | 4.86 |
| WM Licensing Oracle | 0.2739 | 0.1801 | 0.2785 | 0.1805 | 4.58 | 4.51 | 3.79 | 4.78 |
| RMC_2 | 0.2192 | 0.2497 | 0.2059 | 0.2340 | 4.56 | 3.94 | 4.34 | 4.75 |
| pancras_naive | 0.2691 | 0.2079 | 0.2823 | 0.2153 | 4.61 | 4.79 | 4.43 | 4.65 |
| pancras_crag | 0.2691 | 0.2079 | 0.2823 | 0.2153 | 4.61 | 4.79 | 4.43 | 4.65 |
| DMISTeam3 | 0.2769 | 0.2571 | 0.2780 | 0.2554 | 4.64 | 4.58 | 4.50 | 4.63 |
| h-nlp-autob-medcpt | 0.0209 | 0.0291 | 0.0207 | 0.0293 | 1.05 | 0.81 | 1.08 | 1.15 |
| health-nlp-4 | 0.0200 | 0.0264 | 0.0212 | 0.0279 | 0.83 | 0.78 | 0.95 | 1.13 |
| health-nlp-3 | 0.0140 | 0.0193 | 0.0151 | 0.0201 | 0.80 | 0.63 | 0.91 | 0.95 |
| health-nlp-2 | 0.0144 | 0.0193 | 0.0166 | 0.0218 | 0.74 | 0.63 | 0.83 | 1.03 |
| health-nlp-1 | 0.0112 | 0.0138 | 0.0140 | 0.0164 | 0.94 | 0.58 | 0.71 | 1.05 |
| ubuntu | 0.0620 | 0.0671 | 0.0572 | 0.0599 | 3.03 | 2.84 | 3.44 | 4.29 |
| MedQA-1 | 0.3060 | 0.3042 | 0.2975 | 0.2942 | 4.78 | 4.61 | 4.69 | 4.89 |
| MedQA-2 | 0.2947 | 0.3038 | 0.2867 | 0.2949 | 4.74 | 4.54 | 4.73 | 4.89 |
| MedQA-3 | 0.2946 | 0.3038 | 0.2867 | 0.2949 | 4.74 | 4.54 | 4.73 | 4.89 |
| MedQA-4 | 0.2482 | 0.2431 | 0.2514 | 0.2447 | 4.50 | 4.49 | 4.64 | 4.65 |
| MedQA-5 | 0.2994 | 0.2989 | 0.2922 | 0.2907 | 4.73 | 4.56 | 4.73 | 4.84 |
| Organization name | 0.2624 | 0.1973 | 0.2604 | 0.1940 | 4.59 | 4.31 | 4.04 | 4.69 |
| CSA-IISR 1st | 0.2429 | 0.2556 | 0.2348 | 0.2466 | 4.53 | 4.40 | 4.50 | 4.80 |
| CSA-IISR 2nd | 0.2622 | 0.2535 | 0.2578 | 0.2474 | 4.50 | 4.46 | 4.40 | 4.78 |
| CSA-IISR 3rd | 0.2491 | 0.2320 | 0.2454 | 0.2268 | 4.50 | 4.39 | 4.43 | 4.78 |
| DS@GT-BioASQ | 0.1760 | 0.1813 | 0.1767 | 0.1814 | 4.64 | 3.31 | 4.10 | 4.80 |
| dmiip2024 | 0.2202 | 0.2615 | 0.2115 | 0.2516 | 4.75 | 4.31 | 4.61 | 4.86 |
| dmiip2024_1 | 0.2289 | 0.2623 | 0.2220 | 0.2557 | 4.79 | 4.14 | 4.79 | 4.94 |
| dmiip2024_2 | 0.2572 | 0.2854 | 0.2452 | 0.2729 | 4.76 | 4.46 | 4.63 | 4.81 |
| dmiip2024_4 | 0.2332 | 0.2784 | 0.2201 | 0.2641 | 4.78 | 4.19 | 4.66 | 4.80 |
| dmiip2024_3 | 0.2682 | 0.2959 | 0.2580 | 0.2849 | 4.74 | 4.33 | 4.59 | 4.84 |
| porties-llama3-base | 0.2991 | 0.1641 | 0.3100 | 0.1671 | 4.44 | 4.46 | 3.69 | 4.65 |
| dictycite-baseline | 0.2910 | 0.2434 | 0.2869 | 0.2369 | 4.58 | 4.34 | 4.28 | 4.66 |
| DMIS_MES_TEST_1 | 0.2769 | 0.2571 | 0.2780 | 0.2554 | 4.64 | 4.58 | 4.50 | 4.63 |
| DMIS_MES_TEST_2 | 0.2769 | 0.2571 | 0.2780 | 0.2554 | 4.64 | 4.58 | 4.50 | 4.63 |
| DMIS_MES_TEST_3 | 0.2769 | 0.2571 | 0.2780 | 0.2554 | 4.64 | 4.58 | 4.50 | 4.63 |
| IR_Y-1 | 0.0448 | 0.0585 | 0.0432 | 0.0569 | 3.39 | 3.83 | 3.51 | 4.23 |
| DMIS_MES_TEST_4 | 0.2769 | 0.2571 | 0.2780 | 0.2554 | 4.64 | 4.58 | 4.50 | 4.63 |
| DMIS_MES_TEST_5 | 0.2769 | 0.2571 | 0.2780 | 0.2554 | 4.64 | 4.58 | 4.50 | 4.63 |
| IR_J-1 | - | - | - | - | 0.44 | 0.39 | 0.44 | 0.44 |
| IR_J-2 | 0.2375 | 0.1957 | 0.2331 | 0.1895 | 4.60 | 4.56 | 4.06 | 4.61 |
| IR_J-3 | 0.2461 | 0.1864 | 0.2416 | 0.1792 | 4.66 | 4.63 | 4.10 | 4.76 |
| IR_J-4 | 0.2063 | 0.1649 | 0.2038 | 0.1593 | 4.51 | 4.48 | 3.84 | 4.64 |
| IR_J-5 | 0.2496 | 0.2548 | 0.2444 | 0.2481 | 4.51 | 4.31 | 4.40 | 4.71 |
| IR_Y-2 | 0.0489 | 0.0617 | 0.0469 | 0.0594 | 3.38 | 3.91 | 3.64 | 4.24 |
| IR_Y-3 | 0.1929 | 0.1980 | 0.1883 | 0.1922 | 3.64 | 4.09 | 4.20 | 4.08 |
| IR_Y-5 | 0.2208 | 0.1966 | 0.2194 | 0.1942 | 3.61 | 4.39 | 4.13 | 4.00 |
| EP-1 | 0.2551 | 0.2326 | 0.2557 | 0.2318 | 4.68 | 4.41 | 4.48 | 4.83 |
| IR_Y-4 | 0.1846 | 0.1876 | 0.1805 | 0.1830 | 4.05 | 3.93 | 4.28 | 4.53 |
| EP-2 | 0.2885 | 0.2660 | 0.2825 | 0.2582 | 4.75 | 4.48 | 4.61 | 4.81 |
| config-1 | 0.3952 | 0.1977 | 0.3983 | 0.1954 | 4.60 | 4.81 | 3.86 | 4.63 |
| config-2 | 0.3829 | 0.1895 | 0.3858 | 0.1870 | 4.51 | 4.81 | 3.76 | 4.66 |
| EP-3 | 0.2681 | 0.2410 | 0.2667 | 0.2380 | 4.68 | 4.38 | 4.48 | 4.74 |
| EP-4 | 0.2385 | 0.2101 | 0.2387 | 0.2096 | 4.73 | 4.41 | 4.46 | 4.84 |
| Fleming-1 | 0.3412 | 0.1769 | 0.3461 | 0.1771 | 4.55 | 4.65 | 3.79 | 4.50 |
| EP-5 | 0.2163 | 0.1896 | 0.2223 | 0.1945 | 4.69 | 4.39 | 4.45 | 4.83 |
| ku_dmis | - | - | - | - | - | - | - | - |
| UR-IW-1 | 0.3132 | 0.1923 | 0.3186 | 0.1933 | 4.61 | 4.65 | 3.88 | 4.76 |
| UR-IW-2 | 0.2887 | 0.2303 | 0.2951 | 0.2316 | 4.65 | 4.53 | 4.24 | 4.75 |
| UR-IW-3 | 0.2272 | 0.1913 | 0.2342 | 0.1945 | 4.69 | 4.66 | 4.34 | 4.73 |
| UR-IW-4 | 0.2212 | 0.2461 | 0.2160 | 0.2414 | 4.81 | 4.28 | 4.60 | 4.85 |
| UR-IW-5 | 0.2427 | 0.2444 | 0.2429 | 0.2439 | 4.68 | 4.46 | 4.50 | 4.84 |
| bioinfo-0 | 0.3170 | 0.1861 | 0.3219 | 0.1858 | 4.65 | 4.61 | 3.93 | 4.78 |
| CSA-IISR 4th | 0.2499 | 0.2358 | 0.2458 | 0.2305 | 4.25 | 4.15 | 4.11 | 4.50 |
| CSA-IISR 5st | 0.2548 | 0.2436 | 0.2515 | 0.2391 | 4.41 | 4.29 | 4.34 | 4.78 |
| Dif-C | 0.2631 | 0.2956 | 0.2516 | 0.2847 | 4.71 | 4.30 | 4.58 | 4.81 |
| Bio26NIA | 0.2722 | 0.2991 | 0.2638 | 0.2902 | 4.69 | 4.45 | 4.61 | 4.86 |
| Another | 0.1742 | 0.1812 | 0.1773 | 0.1842 | 4.59 | 4.43 | 4.69 | 4.85 |
| bioinfo-1 | 0.2895 | 0.1332 | 0.2933 | 0.1319 | 3.49 | 3.63 | 2.71 | 3.61 |
| BioASQ_Baseline | - | - | - | - | - | - | - | - |
Test batch 2
Exact Answers
| Yes/No | Factoid | List | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| System | Accuracy | F1 Yes | F1 No | Macro F1 | Strict Acc. | Lenient Acc. | MRR | Mean Prec. | Recall | F-Measure |
| Hybrid Retrieval | 0.7619 | 0.8148 | 0.6667 | 0.7407 | 0.2500 | 0.3000 | 0.2750 | 0.3205 | 0.2209 | 0.2434 |
| 13b-1 | 0.9048 | 0.9231 | 0.8750 | 0.8990 | 0.5000 | 0.5000 | 0.5000 | 0.5647 | 0.4450 | 0.4781 |
| 13b_phase_a | 0.9048 | 0.9231 | 0.8750 | 0.8990 | 0.5000 | 0.5500 | 0.5250 | 0.5647 | 0.4450 | 0.4781 |
| dictycite-baseline | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5500 | 0.5500 | 0.5500 | 0.6805 | 0.5647 | 0.5875 |
| dictycite-max-rew-sl | 0.9524 | 0.9655 | 0.9231 | 0.9443 | 0.5000 | 0.6500 | 0.5583 | 0.6173 | 0.6331 | 0.6107 |
| health-nlp-1 | 0.8095 | 0.8667 | 0.6667 | 0.7667 | 0.3000 | 0.3000 | 0.3000 | 0.1742 | 0.1111 | 0.1125 |
| health-nlp-2 | 0.7619 | 0.8485 | 0.4444 | 0.6465 | 0.3000 | 0.3000 | 0.3000 | 0.1417 | 0.1356 | 0.1161 |
| health-nlp-3 | 0.8571 | 0.9032 | 0.7273 | 0.8152 | 0.4500 | 0.4500 | 0.4500 | 0.4391 | 0.2800 | 0.3087 |
| health-nlp-4 | 0.8571 | 0.8800 | 0.8235 | 0.8518 | 0.0500 | 0.0500 | 0.0500 | 0.1050 | 0.0865 | 0.0902 |
| pancras_naive | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.4000 | 0.5500 | 0.4475 | 0.5741 | 0.6302 | 0.5817 |
| pancras_crag | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.4000 | 0.5500 | 0.4475 | 0.5741 | 0.6302 | 0.5817 |
| "RMC_1" | 0.8571 | 0.8889 | 0.8000 | 0.8444 | 0.2000 | 0.2000 | 0.2000 | 0.3901 | 0.3352 | 0.3367 |
| RMC_2 | 0.9048 | 0.9231 | 0.8750 | 0.8990 | 0.4500 | 0.4500 | 0.4500 | 0.4462 | 0.3873 | 0.3951 |
| ossllm | 0.8571 | 0.8889 | 0.8000 | 0.8444 | 0.6000 | 0.6500 | 0.6250 | 0.5077 | 0.5144 | 0.4899 |
| MedQA-1 | 0.9524 | 0.9655 | 0.9231 | 0.9443 | 0.6500 | 0.7500 | 0.7000 | 0.6234 | 0.5870 | 0.5962 |
| MedQA-2 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.6000 | 0.7000 | 0.6500 | 0.5132 | 0.5212 | 0.5047 |
| MedQA-3 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.6500 | 0.7500 | 0.6917 | 0.5693 | 0.6229 | 0.5813 |
| MedQA-4 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.6500 | 0.7500 | 0.6917 | 0.6126 | 0.6011 | 0.6000 |
| MedQA-5 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.6500 | 0.7500 | 0.6917 | 0.6126 | 0.6011 | 0.6000 |
| Fleming-1 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.5000 | 0.6500 | 0.5583 | 0.5050 | 0.5867 | 0.5243 |
| DSGT | 0.6667 | 0.8000 | - | 0.4000 | 0.1500 | 0.1500 | 0.1500 | 0.1026 | 0.0705 | 0.0799 |
| lean_rag | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.5000 | 0.5500 | 0.5250 | 0.5383 | 0.5053 | 0.5085 |
| bioinfo-0 | 0.8571 | 0.8800 | 0.8235 | 0.8518 | 0.5000 | 0.5000 | 0.5000 | 0.5523 | 0.4693 | 0.4885 |
| bioinfo-2 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.5500 | 0.5500 | 0.5500 | 0.5512 | 0.5300 | 0.5315 |
| bioinfo-3 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.5500 | 0.6000 | 0.5750 | 0.5549 | 0.6035 | 0.5631 |
| bioinfo-4 | 0.8571 | 0.8800 | 0.8235 | 0.8518 | 0.5500 | 0.6000 | 0.5750 | 0.6000 | 0.4735 | 0.4936 |
| bioinfo-1 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.6000 | 0.6000 | 0.6000 | 0.4286 | 0.4075 | 0.4125 |
| bm25 + splade | 0.9048 | 0.9231 | 0.8750 | 0.8990 | 0.6000 | 0.6000 | 0.6000 | 0.6173 | 0.5808 | 0.5810 |
| CSA-IISR 1st | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.6500 | 0.6500 | 0.6500 | 0.6068 | 0.6073 | 0.5994 |
| CSA-IISR 2nd | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.6500 | 0.6500 | 0.6500 | 0.5836 | 0.6213 | 0.5965 |
| CSA-IISR 3rd | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.6500 | 0.6500 | 0.6500 | 0.5769 | 0.6052 | 0.5819 |
| CSA-IISR 4th | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.6500 | 0.6500 | 0.6500 | 0.6027 | 0.5768 | 0.5836 |
| CSA-IISR 5st | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.6500 | 0.7000 | 0.6667 | 0.6068 | 0.6073 | 0.5994 |
| DS@GT-BioASQ | 0.8571 | 0.8966 | 0.7692 | 0.8329 | 0.3000 | 0.3000 | 0.3000 | 0.3292 | 0.2966 | 0.3072 |
| mckpt2 | 0.7619 | 0.8276 | 0.6154 | 0.7215 | 0.4500 | 0.5000 | 0.4667 | 0.5000 | 0.5169 | 0.4911 |
| dmiip2024 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.5000 | 0.6000 | 0.5500 | 0.6679 | 0.4222 | 0.4845 |
| dmiip2024_1 | 0.9524 | 0.9655 | 0.9231 | 0.9443 | 0.6000 | 0.6500 | 0.6250 | 0.5795 | 0.4035 | 0.4500 |
| dmiip2024_2 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.5000 | 0.6500 | 0.5667 | 0.6154 | 0.5130 | 0.5120 |
| dmiip2024_3 | 0.8571 | 0.8889 | 0.8000 | 0.8444 | 0.6000 | 0.6500 | 0.6250 | 0.5205 | 0.3724 | 0.4190 |
| dmiip2024_4 | 0.9048 | 0.9333 | 0.8333 | 0.8833 | 0.5500 | 0.6000 | 0.5750 | 0.6385 | 0.3757 | 0.4484 |
| qwen | 0.8571 | 0.8889 | 0.8000 | 0.8444 | 0.6000 | 0.6500 | 0.6100 | 0.4692 | 0.5566 | 0.4792 |
| mckpt1 | 0.9048 | 0.9231 | 0.8750 | 0.8990 | 0.6000 | 0.6000 | 0.6000 | 0.3782 | 0.3877 | 0.3683 |
| Biomedical QA system | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.2500 | 0.2500 | 0.2500 | 0.5480 | 0.6241 | 0.5650 |
| Biomedical QA s. v2 | 0.9524 | 0.9655 | 0.9231 | 0.9443 | 0.3000 | 0.3000 | 0.3000 | 0.1543 | 0.6446 | 0.2385 |
| Biomedical QA s3 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.2500 | 0.2500 | 0.2500 | 0.5343 | 0.6327 | 0.5615 |
| Biomedical QA s.4 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.2500 | 0.2500 | 0.2500 | 0.5558 | 0.6327 | 0.5751 |
| WM Licensing Oracle | 0.8571 | 0.8889 | 0.8000 | 0.8444 | 0.2500 | 0.2500 | 0.2500 | 0.5834 | 0.6275 | 0.5822 |
| ubuntu | 0.9048 | 0.9333 | 0.8333 | 0.8833 | 0.4000 | 0.4500 | 0.4250 | 0.4820 | 0.3695 | 0.4058 |
| DMIS_MES_TEST_1 | 0.8095 | 0.8571 | 0.7143 | 0.7857 | 0.5000 | 0.6000 | 0.5500 | 0.6295 | 0.4785 | 0.5237 |
| DMIS_MES_TEST_2 | 0.8095 | 0.8571 | 0.7143 | 0.7857 | 0.5000 | 0.6000 | 0.5500 | 0.6295 | 0.4785 | 0.5237 |
| DMIS_MES_TEST_3 | 0.8095 | 0.8571 | 0.7143 | 0.7857 | 0.5000 | 0.6000 | 0.5500 | 0.6295 | 0.4785 | 0.5237 |
| DMIS_MES_TEST_4 | 0.8095 | 0.8571 | 0.7143 | 0.7857 | 0.5000 | 0.6000 | 0.5500 | 0.6295 | 0.4785 | 0.5237 |
| DMIS_MES_TEST_5 | 0.8095 | 0.8571 | 0.7143 | 0.7857 | 0.5000 | 0.6000 | 0.5500 | 0.6295 | 0.4785 | 0.5237 |
| IR_J-1 | 0.9048 | 0.9333 | 0.8333 | 0.8833 | 0.5000 | 0.5000 | 0.5000 | 0.4936 | 0.4751 | 0.4751 |
| IR_J-2 | 0.8095 | 0.8462 | 0.7500 | 0.7981 | 0.4500 | 0.5000 | 0.4750 | 0.2930 | 0.2585 | 0.2614 |
| IR_J-3 | 0.8571 | 0.8889 | 0.8000 | 0.8444 | 0.5500 | 0.5500 | 0.5500 | 0.5036 | 0.4823 | 0.4648 |
| IR_J-4 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.6000 | 0.6500 | 0.6250 | 0.4702 | 0.5985 | 0.5135 |
| IR_J-5 | 0.9048 | 0.9231 | 0.8750 | 0.8990 | 0.5500 | 0.6000 | 0.5750 | 0.5254 | 0.5819 | 0.5472 |
| Organization name | 0.6190 | 0.6364 | 0.6000 | 0.6182 | 0.6000 | 0.6000 | 0.6000 | 0.1000 | 0.0524 | 0.0647 |
| UR-IW-1 | 0.9048 | 0.9333 | 0.8333 | 0.8833 | 0.4500 | 0.6500 | 0.5500 | 0.3547 | 0.6643 | 0.4410 |
| UR-IW-2 | 0.9048 | 0.9333 | 0.8333 | 0.8833 | 0.6000 | 0.7000 | 0.6333 | 0.5186 | 0.6866 | 0.5848 |
| UR-IW-3 | 0.9048 | 0.9333 | 0.8333 | 0.8833 | 0.5500 | 0.6000 | 0.5750 | 0.4196 | 0.6794 | 0.5015 |
| UR-IW-4 | 0.9524 | 0.9655 | 0.9231 | 0.9443 | 0.5500 | 0.6000 | 0.5750 | 0.4137 | 0.4471 | 0.4175 |
| UR-IW-5 | 0.9048 | 0.9231 | 0.8750 | 0.8990 | 0.4000 | 0.4500 | 0.4250 | 0.3503 | 0.6097 | 0.4196 |
| ku_dmis | 0.9524 | 0.9655 | 0.9231 | 0.9443 | 0.5500 | 0.7500 | 0.6142 | 0.6098 | 0.5529 | 0.5695 |
| ku_dmis_2 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.5500 | 0.7500 | 0.6142 | 0.6088 | 0.3603 | 0.4239 |
| ku_dmis_3 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.5500 | 0.7500 | 0.6142 | 0.5830 | 0.4539 | 0.4933 |
| ku_dmis_4 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.5500 | 0.7500 | 0.6142 | 0.6078 | 0.5727 | 0.5781 |
| ku_dmis_5 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.5500 | 0.7500 | 0.6142 | 0.6078 | 0.5727 | 0.5781 |
| IR_Y-1 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.2000 | 0.5500 | 0.3517 | 0.3092 | 0.3227 | 0.2974 |
| IR_Y-2 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.3000 | 0.6500 | 0.4367 | 0.2982 | 0.3284 | 0.2914 |
| IR_Y-3 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.4000 | 0.6500 | 0.5250 | 0.3058 | 0.3377 | 0.3057 |
| IR_Y-4 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.4500 | 0.6500 | 0.5500 | 0.2919 | 0.2869 | 0.2743 |
| IR_Y-5 | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.3000 | 0.6500 | 0.4417 | 0.3180 | 0.3517 | 0.3234 |
| Bio26NIA | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.5500 | 0.6000 | 0.5667 | 0.6203 | 0.5681 | 0.5793 |
| Another | 0.9524 | 0.9655 | 0.9231 | 0.9443 | 0.6000 | 0.6000 | 0.6000 | 0.6316 | 0.6059 | 0.6086 |
| Dif-C | 0.9048 | 0.9286 | 0.8571 | 0.8929 | 0.6000 | 0.6000 | 0.6000 | 0.6284 | 0.5964 | 0.5998 |
| EP-1 | 0.9524 | 0.9655 | 0.9231 | 0.9443 | 0.6000 | 0.6000 | 0.6000 | 0.6692 | 0.4593 | 0.5191 |
| EP-2 | 0.9524 | 0.9655 | 0.9231 | 0.9443 | 0.6000 | 0.6000 | 0.6000 | 0.6532 | 0.4677 | 0.5244 |
| EP-3 | 0.9524 | 0.9655 | 0.9231 | 0.9443 | 0.6000 | 0.6500 | 0.6250 | 0.6628 | 0.4737 | 0.5317 |
| EP-4 | 0.9524 | 0.9655 | 0.9231 | 0.9443 | 0.6000 | 0.6000 | 0.6000 | 0.6564 | 0.4415 | 0.5018 |
| EP-5 | 0.9524 | 0.9655 | 0.9231 | 0.9443 | 0.5500 | 0.6500 | 0.5917 | 0.6521 | 0.4869 | 0.5308 |
| LLM Biomedical QA | 0.8571 | 0.8966 | 0.7692 | 0.8329 | 0.3000 | 0.3000 | 0.3000 | 0.0620 | 0.1480 | 0.0769 |
| BioASQ_Baseline | 0.3810 | 0.2353 | 0.4800 | 0.3576 | 0.1000 | 0.1500 | 0.1250 | 0.1682 | 0.2154 | 0.1685 |
Ideal Answers
| Automatic scores (Rouge - R) | Manual scores | |||||||
|---|---|---|---|---|---|---|---|---|
| System | R-2 (Rec) | R-2 (F1) | R-SU4 (Rec) | R-SU4 (F1) | Readability | Recall | Precision | Repetition |
| Hybrid Retrieval | 0.2117 | 0.1408 | 0.2107 | 0.1391 | 3.49 | 3.96 | 3.91 | 4.63 |
| 13b-1 | 0.1621 | 0.2182 | 0.1521 | 0.2080 | 4.91 | 3.79 | 4.84 | 5.00 |
| 13b_phase_a | 0.1621 | 0.2182 | 0.1521 | 0.2080 | 4.91 | 3.79 | 4.84 | 5.00 |
| dictycite-baseline | 0.2958 | 0.2555 | 0.2882 | 0.2488 | 4.73 | 4.38 | 4.51 | 4.73 |
| dictycite-max-rew-sl | 0.3135 | 0.3039 | 0.3042 | 0.2941 | 4.84 | 4.63 | 4.66 | 4.96 |
| health-nlp-1 | 0.0293 | 0.0329 | 0.0304 | 0.0346 | 1.18 | 0.91 | 1.24 | 1.51 |
| health-nlp-2 | 0.0324 | 0.0351 | 0.0335 | 0.0366 | 1.09 | 0.96 | 1.30 | 1.45 |
| health-nlp-3 | 0.0230 | 0.0273 | 0.0247 | 0.0291 | 1.18 | 0.94 | 1.26 | 1.50 |
| health-nlp-4 | 0.0479 | 0.0531 | 0.0484 | 0.0538 | 1.11 | 1.00 | 1.39 | 1.55 |
| pancras_naive | 0.2773 | 0.2074 | 0.2855 | 0.2124 | 4.71 | 4.71 | 4.39 | 4.74 |
| pancras_crag | 0.2773 | 0.2074 | 0.2855 | 0.2124 | 4.71 | 4.71 | 4.39 | 4.74 |
| "RMC_1" | 0.1992 | 0.2410 | 0.1866 | 0.2276 | 4.56 | 3.53 | 4.56 | 4.95 |
| RMC_2 | 0.2521 | 0.2631 | 0.2434 | 0.2539 | 4.61 | 4.14 | 4.58 | 4.85 |
| ossllm | 0.3262 | 0.2220 | 0.3259 | 0.2209 | 4.65 | 4.44 | 4.11 | 4.60 |
| MedQA-1 | 0.3188 | 0.2993 | 0.3055 | 0.2860 | 4.69 | 4.58 | 4.65 | 4.93 |
| MedQA-2 | 0.2406 | 0.2336 | 0.2360 | 0.2304 | 4.49 | 4.28 | 4.58 | 4.65 |
| MedQA-3 | 0.2934 | 0.2815 | 0.2832 | 0.2715 | 4.56 | 4.36 | 4.70 | 4.90 |
| MedQA-4 | 0.2973 | 0.2808 | 0.2874 | 0.2714 | 4.45 | 4.29 | 4.61 | 4.90 |
| MedQA-5 | 0.3019 | 0.2861 | 0.2921 | 0.2767 | 4.58 | 4.35 | 4.68 | 4.89 |
| Fleming-1 | 0.3563 | 0.1944 | 0.3558 | 0.1938 | 4.58 | 4.61 | 3.96 | 4.53 |
| DSGT | 0.0889 | 0.1023 | 0.0872 | 0.1007 | 2.60 | 1.95 | 2.56 | 2.70 |
| lean_rag | 0.2463 | 0.2615 | 0.2409 | 0.2562 | 4.65 | 4.34 | 4.63 | 4.76 |
| bioinfo-0 | 0.2515 | 0.2356 | 0.2508 | 0.2296 | 4.74 | 4.60 | 4.48 | 4.84 |
| bioinfo-2 | 0.3274 | 0.2622 | 0.3227 | 0.2556 | 4.89 | 4.70 | 4.21 | 4.99 |
| bioinfo-3 | 0.3799 | 0.1828 | 0.3825 | 0.1825 | 4.75 | 4.74 | 3.66 | 4.88 |
| bioinfo-4 | 0.3200 | 0.2232 | 0.3143 | 0.2182 | 4.76 | 4.36 | 4.00 | 4.91 |
| bioinfo-1 | 0.3110 | 0.2123 | 0.3094 | 0.2099 | 4.66 | 4.81 | 4.09 | 4.85 |
| bm25 + splade | 0.2873 | 0.2844 | 0.2752 | 0.2718 | 4.79 | 4.29 | 4.66 | 4.78 |
| CSA-IISR 1st | 0.2854 | 0.2585 | 0.2794 | 0.2526 | 4.55 | 4.49 | 4.54 | 4.84 |
| CSA-IISR 2nd | 0.2684 | 0.2450 | 0.2652 | 0.2406 | 4.61 | 4.51 | 4.51 | 4.85 |
| CSA-IISR 3rd | 0.2835 | 0.2543 | 0.2769 | 0.2481 | 4.46 | 4.40 | 4.45 | 4.74 |
| CSA-IISR 4th | 0.2374 | 0.2144 | 0.2373 | 0.2141 | 4.51 | 4.39 | 4.49 | 4.85 |
| CSA-IISR 5st | 0.2786 | 0.2412 | 0.2732 | 0.2361 | 4.63 | 4.45 | 4.55 | 4.79 |
| DS@GT-BioASQ | 0.1276 | 0.1533 | 0.1229 | 0.1494 | 4.11 | 3.16 | 4.13 | 4.38 |
| mckpt2 | 0.2073 | 0.1790 | 0.2016 | 0.1736 | 4.08 | 4.16 | 3.86 | 4.20 |
| dmiip2024 | 0.2580 | 0.2842 | 0.2433 | 0.2682 | 4.76 | 4.31 | 4.70 | 4.91 |
| dmiip2024_1 | 0.2183 | 0.2473 | 0.2113 | 0.2419 | 4.91 | 4.10 | 4.76 | 4.98 |
| dmiip2024_2 | 0.2587 | 0.2776 | 0.2507 | 0.2693 | 4.84 | 4.25 | 4.65 | 4.73 |
| dmiip2024_3 | 0.2695 | 0.2967 | 0.2585 | 0.2861 | 4.89 | 4.33 | 4.74 | 4.95 |
| dmiip2024_4 | 0.2516 | 0.2823 | 0.2404 | 0.2708 | 4.84 | 4.14 | 4.76 | 4.86 |
| qwen | 0.3754 | 0.1712 | 0.3761 | 0.1711 | 4.19 | 4.66 | 3.68 | 4.20 |
| mckpt1 | 0.2032 | 0.1907 | 0.2012 | 0.1870 | 4.20 | 4.24 | 3.91 | 4.18 |
| Biomedical QA system | 0.3137 | 0.1783 | 0.3207 | 0.1804 | 4.74 | 4.69 | 3.85 | 4.88 |
| Biomedical QA s. v2 | 0.3242 | 0.1655 | 0.3308 | 0.1678 | 4.65 | 4.73 | 3.71 | 4.83 |
| Biomedical QA s3 | 0.3160 | 0.1747 | 0.3208 | 0.1762 | 4.68 | 4.61 | 3.71 | 4.86 |
| Biomedical QA s.4 | 0.3159 | 0.1740 | 0.3244 | 0.1775 | 4.60 | 4.63 | 3.71 | 4.88 |
| WM Licensing Oracle | 0.3011 | 0.1945 | 0.3041 | 0.1955 | 4.81 | 4.59 | 4.06 | 4.88 |
| ubuntu | 0.2335 | 0.2257 | 0.2279 | 0.2205 | 4.29 | 3.88 | 4.39 | 4.85 |
| DMIS_MES_TEST_1 | 0.1178 | 0.0755 | 0.1172 | 0.0741 | 1.58 | 1.89 | 1.68 | 1.59 |
| DMIS_MES_TEST_2 | 0.1178 | 0.0755 | 0.1172 | 0.0741 | 1.58 | 1.89 | 1.68 | 1.59 |
| DMIS_MES_TEST_3 | 0.1178 | 0.0755 | 0.1172 | 0.0741 | 1.58 | 1.89 | 1.68 | 1.59 |
| DMIS_MES_TEST_4 | 0.1178 | 0.0755 | 0.1172 | 0.0741 | 1.58 | 1.89 | 1.68 | 1.59 |
| DMIS_MES_TEST_5 | 0.1178 | 0.0755 | 0.1172 | 0.0741 | 1.58 | 1.89 | 1.68 | 1.59 |
| IR_J-1 | - | - | - | - | 0.95 | 0.35 | 0.95 | 0.95 |
| IR_J-2 | 0.2097 | 0.1429 | 0.2153 | 0.1454 | 4.68 | 4.10 | 3.69 | 4.68 |
| IR_J-3 | 0.2452 | 0.1858 | 0.2444 | 0.1829 | 4.84 | 4.63 | 4.13 | 4.75 |
| IR_J-4 | 0.2436 | 0.2679 | 0.2341 | 0.2583 | 4.66 | 4.30 | 4.53 | 4.81 |
| IR_J-5 | - | - | - | - | 0.95 | 0.35 | 0.95 | 0.95 |
| Organization name | 0.2912 | 0.1986 | 0.2964 | 0.2013 | 3.84 | 4.16 | 3.98 | 4.41 |
| UR-IW-1 | 0.3243 | 0.1765 | 0.3315 | 0.1795 | 4.65 | 4.69 | 3.73 | 4.90 |
| UR-IW-2 | 0.2850 | 0.2166 | 0.2924 | 0.2195 | 4.78 | 4.60 | 4.20 | 4.91 |
| UR-IW-3 | 0.2233 | 0.1899 | 0.2342 | 0.1951 | 4.68 | 4.60 | 4.09 | 4.81 |
| UR-IW-4 | 0.2118 | 0.2313 | 0.2116 | 0.2307 | 4.83 | 4.26 | 4.68 | 4.95 |
| UR-IW-5 | 0.2252 | 0.2239 | 0.2290 | 0.2256 | 4.70 | 4.31 | 4.43 | 4.95 |
| ku_dmis | - | - | - | - | - | - | - | - |
| ku_dmis_2 | - | - | - | - | - | - | - | - |
| ku_dmis_3 | - | - | - | - | - | - | - | - |
| ku_dmis_4 | - | - | - | - | - | - | - | - |
| ku_dmis_5 | - | - | - | - | - | - | - | - |
| IR_Y-1 | 0.1358 | 0.1301 | 0.1290 | 0.1235 | 3.75 | 4.06 | 4.24 | 4.30 |
| IR_Y-2 | 0.1951 | 0.1645 | 0.1895 | 0.1593 | 4.26 | 4.29 | 4.31 | 4.59 |
| IR_Y-3 | 0.2864 | 0.2297 | 0.2800 | 0.2243 | 4.56 | 4.26 | 4.35 | 4.84 |
| IR_Y-4 | 0.2643 | 0.2142 | 0.2610 | 0.2113 | 4.28 | 4.26 | 4.36 | 4.71 |
| IR_Y-5 | 0.1202 | 0.1515 | 0.1136 | 0.1448 | 3.61 | 4.29 | 4.24 | 3.84 |
| Bio26NIA | 0.2994 | 0.3095 | 0.2893 | 0.2996 | 4.84 | 4.45 | 4.79 | 4.94 |
| Another | 0.2758 | 0.2908 | 0.2675 | 0.2816 | 4.79 | 4.44 | 4.71 | 4.95 |
| Dif-C | 0.2552 | 0.2873 | 0.2450 | 0.2774 | 4.80 | 4.36 | 4.79 | 4.91 |
| EP-1 | 0.2939 | 0.2768 | 0.2849 | 0.2677 | 4.84 | 4.43 | 4.65 | 4.98 |
| EP-2 | 0.2820 | 0.2655 | 0.2746 | 0.2576 | 4.90 | 4.45 | 4.65 | 4.96 |
| EP-3 | 0.2863 | 0.2696 | 0.2787 | 0.2624 | 4.86 | 4.49 | 4.69 | 4.95 |
| EP-4 | 0.2859 | 0.2658 | 0.2768 | 0.2574 | 4.79 | 4.41 | 4.63 | 4.98 |
| EP-5 | 0.2619 | 0.2419 | 0.2621 | 0.2419 | 4.84 | 4.54 | 4.66 | 4.91 |
| LLM Biomedical QA | 0.0851 | 0.0970 | 0.0877 | 0.0992 | 3.84 | 3.21 | 4.08 | 4.84 |
| BioASQ_Baseline | - | - | - | - | - | - | - | - |
Test batch 3
Exact Answers
| Yes/No | Factoid | List | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| System | Accuracy | F1 Yes | F1 No | Macro F1 | Strict Acc. | Lenient Acc. | MRR | Mean Prec. | Recall | F-Measure |
| asmalltrialsystem | 0.5000 | 0.4444 | 0.5455 | 0.4949 | - | - | - | 0.1597 | 0.4901 | 0.2222 |
| "RMC_1" | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.2941 | 0.2941 | 0.2941 | 0.4118 | 0.2880 | 0.3273 |
| RMC_2 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.7059 | 0.7059 | 0.7059 | 0.4417 | 0.3857 | 0.3992 |
| MedQA-1 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.7059 | 0.7059 | 0.7059 | 0.5431 | 0.5173 | 0.5098 |
| MedQA-2 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.6471 | 0.6176 | 0.3846 | 0.4990 | 0.4179 |
| MedQA-3 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7647 | 0.6882 | 0.5711 | 0.6072 | 0.5773 |
| MedQA-4 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.6471 | 0.6176 | 0.3651 | 0.4745 | 0.3903 |
| MedQA-5 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7647 | 0.6882 | 0.5431 | 0.5173 | 0.5098 |
| UR-IW-5 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7059 | 0.6765 | 0.2405 | 0.5980 | 0.3191 |
| UR-IW-4 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.6471 | 0.6078 | 0.4159 | 0.5283 | 0.4418 |
| UR-IW-3 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.4706 | 0.5294 | 0.4902 | 0.3548 | 0.5128 | 0.3965 |
| UR-IW-2 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5294 | 0.7059 | 0.5931 | 0.2649 | 0.6373 | 0.3476 |
| UR-IW-1 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5294 | 0.6471 | 0.5784 | 0.3709 | 0.5278 | 0.4056 |
| health-nlp-1 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.4706 | 0.4706 | 0.4706 | 0.1471 | 0.0882 | 0.1054 |
| health-nlp-2 | 0.9000 | 0.9333 | 0.8000 | 0.8667 | 0.3529 | 0.3529 | 0.3529 | 0.1730 | 0.1663 | 0.1691 |
| dictycite-baseline | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7059 | 0.6765 | 0.5189 | 0.4398 | 0.4634 |
| health-nlp-4 | 0.8000 | 0.8750 | 0.5000 | 0.6875 | 0.3529 | 0.3529 | 0.3529 | 0.3424 | 0.2389 | 0.2763 |
| dictycite-max-rew-sl | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.7059 | 0.6471 | 0.4891 | 0.5403 | 0.5046 |
| dictycite-snippet | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7059 | 0.6765 | 0.5248 | 0.4398 | 0.4656 |
| h-nlp-autob-medcpt | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.4706 | 0.4706 | 0.4706 | 0.3775 | 0.2570 | 0.2958 |
| health-nlp-3 | 0.8000 | 0.8750 | 0.5000 | 0.6875 | 0.1765 | 0.1765 | 0.1765 | 0.0902 | 0.0858 | 0.0860 |
| bioinfo-0 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5294 | 0.5882 | 0.5588 | 0.4593 | 0.4506 | 0.4490 |
| bioinfo-1 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.6471 | 0.6471 | 0.4346 | 0.4538 | 0.4176 |
| bioinfo-2 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.6471 | 0.6078 | 0.4398 | 0.4975 | 0.4564 |
| bioinfo-3 | 0.9000 | 0.9231 | 0.8571 | 0.8901 | 0.5882 | 0.6471 | 0.6176 | 0.4236 | 0.4709 | 0.4429 |
| bioinfo-4 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7059 | 0.6765 | 0.4636 | 0.4636 | 0.4457 |
| pancras_naive | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.5882 | 0.5882 | 0.4615 | 0.5285 | 0.4786 |
| pancras_crag | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.5882 | 0.5882 | 0.4615 | 0.5285 | 0.4786 |
| lean_rag | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.5882 | 0.5882 | 0.4660 | 0.3748 | 0.4039 |
| lean_rag_ft | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.6471 | 0.6471 | 0.5542 | 0.4798 | 0.5020 |
| lean_rag_ft_sparse | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.6471 | 0.6471 | 0.5033 | 0.4145 | 0.4419 |
| multi-stage rank&llm | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.7059 | 0.7647 | 0.7353 | 0.5213 | 0.6223 | 0.5484 |
| dmiip2024 | 0.8000 | 0.8750 | 0.5000 | 0.6875 | 0.6471 | 0.7059 | 0.6765 | 0.5324 | 0.4340 | 0.4580 |
| dmiip2024_1 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7059 | 0.6765 | 0.5010 | 0.3983 | 0.4202 |
| dmiip2024_2 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7647 | 0.6912 | 0.4588 | 0.4277 | 0.4100 |
| dmiip2024_3 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7059 | 0.6667 | 0.4353 | 0.3735 | 0.3773 |
| dmiip2024_4 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7059 | 0.6765 | 0.4931 | 0.3952 | 0.4221 |
| CSA-IISR 1st | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7647 | 0.7059 | 0.5737 | 0.6160 | 0.5799 |
| CSA-IISR 2nd | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7647 | 0.7059 | 0.5821 | 0.6160 | 0.5861 |
| CSA-IISR 3rd | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7647 | 0.6882 | 0.5822 | 0.6373 | 0.5931 |
| CSA-IISR 4th | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7647 | 0.6882 | 0.5698 | 0.6225 | 0.5791 |
| CSA-IISR 5st | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.7059 | 0.7059 | 0.7059 | 0.5809 | 0.5925 | 0.5621 |
| IR_J-1 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.6471 | 0.6471 | 0.5828 | 0.4545 | 0.4955 |
| IR_J-2 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5294 | 0.5882 | 0.5588 | 0.5225 | 0.4951 | 0.4989 |
| IR_J-3 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.6471 | 0.6471 | 0.5157 | 0.4282 | 0.4585 |
| Organization name | 0.6000 | 0.7500 | - | 0.3750 | 0.7059 | 0.7059 | 0.7059 | 0.2431 | 0.1559 | 0.1786 |
| IR_J-4 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.7059 | 0.6225 | 0.5623 | 0.5899 | 0.5520 |
| IR_J-5 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7059 | 0.6667 | 0.5605 | 0.4624 | 0.4787 |
| DS@GT-BioASQ | 0.9000 | 0.9231 | 0.8571 | 0.8901 | 0.5882 | 0.5882 | 0.5882 | 0.3480 | 0.2647 | 0.2960 |
| Fleming-1 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.2941 | 0.5882 | 0.4235 | 0.5074 | 0.6182 | 0.5330 |
| LLM Biomedical QA | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5294 | 0.5294 | 0.5294 | 0.4560 | 0.4186 | 0.4255 |
| DMIS_MES_TEST_1 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.7059 | 0.7059 | 0.7059 | 0.5637 | 0.4157 | 0.4661 |
| DMIS_MES_TEST_2 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.7059 | 0.7059 | 0.7059 | 0.5637 | 0.4157 | 0.4661 |
| DMIS_MES_TEST_3 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.7059 | 0.7059 | 0.7059 | 0.5637 | 0.4157 | 0.4661 |
| DMIS_MES_TEST_4 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.7059 | 0.7059 | 0.7059 | 0.5637 | 0.4157 | 0.4661 |
| DMIS_MES_TEST_5 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.7059 | 0.7059 | 0.7059 | 0.5637 | 0.4157 | 0.4661 |
| Gen-Doc | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.5882 | 0.5882 | 0.4584 | 0.4186 | 0.4278 |
| ku_dmis | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.5882 | 0.5882 | 0.5735 | 0.4100 | 0.4650 |
| ku_dmis_2 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.7059 | 0.6471 | 0.5010 | 0.4485 | 0.4640 |
| ku_dmis_3 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.7059 | 0.6471 | 0.5078 | 0.5730 | 0.5279 |
| ku_dmis_4 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.7059 | 0.6471 | 0.4899 | 0.6078 | 0.5213 |
| ku_dmis_5 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.7059 | 0.6471 | 0.4899 | 0.6078 | 0.5213 |
| llama for 14b b | 0.9000 | 0.9333 | 0.8000 | 0.8667 | 0.4706 | 0.4706 | 0.4706 | 0.0588 | 0.0588 | 0.0588 |
| agentic graph | 0.7000 | 0.7273 | 0.6667 | 0.6970 | 0.4118 | 0.4706 | 0.4314 | 0.2948 | 0.3331 | 0.2985 |
| EP-1 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7059 | 0.6667 | 0.5106 | 0.4531 | 0.4630 |
| EP-2 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7647 | 0.6961 | 0.4389 | 0.5535 | 0.4751 |
| EP-3 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.2941 | 0.7647 | 0.5098 | 0.4824 | 0.4046 | 0.4186 |
| EP-4 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7059 | 0.6667 | 0.5124 | 0.4772 | 0.4746 |
| IR_Y-1 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.3529 | 0.6471 | 0.4804 | 0.4288 | 0.4542 | 0.4277 |
| IR_Y-2 | 0.8000 | 0.8750 | 0.5000 | 0.6875 | 0.4706 | 0.6471 | 0.5441 | 0.3725 | 0.4170 | 0.3819 |
| IR_Y-3 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7059 | 0.6618 | 0.3529 | 0.4117 | 0.3634 |
| IR_Y-4 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7059 | 0.6588 | 0.4374 | 0.4519 | 0.4342 |
| IR_Y-5 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7059 | 0.6618 | 0.4157 | 0.4004 | 0.3981 |
| Another | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.6471 | 0.7059 | 0.6765 | 0.6090 | 0.5954 | 0.5898 |
| Dif-C | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.5882 | 0.6471 | 0.6176 | 0.4640 | 0.4484 | 0.4446 |
| EP-5 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.2941 | 0.7647 | 0.5098 | 0.4824 | 0.3956 | 0.4132 |
| Bio26NIA | 1.0000 | 1.0000 | 1.0000 | 1.0000 | - | - | - | 0.5365 | 0.5595 | 0.5411 |
| BioASQ_Baseline | 0.4000 | 0.4000 | 0.4000 | 0.4000 | 0.0588 | 0.2353 | 0.1373 | 0.1933 | 0.2254 | 0.1954 |
Ideal Answers
| Automatic scores (Rouge - R) | Manual scores | |||||||
|---|---|---|---|---|---|---|---|---|
| System | R-2 (Rec) | R-2 (F1) | R-SU4 (Rec) | R-SU4 (F1) | Readability | Recall | Precision | Repetition |
| asmalltrialsystem | 0.1483 | 0.1128 | 0.1560 | 0.1186 | 4.33 | 3.94 | 3.92 | 4.78 |
| "RMC_1" | 0.2082 | 0.2478 | 0.1938 | 0.2333 | 4.92 | 3.86 | 4.76 | 5.00 |
| RMC_2 | 0.2719 | 0.2861 | 0.2589 | 0.2736 | 4.96 | 4.37 | 4.69 | 4.98 |
| MedQA-1 | 0.2670 | 0.2512 | 0.2638 | 0.2484 | 4.80 | 4.41 | 4.63 | 5.00 |
| MedQA-2 | 0.2935 | 0.2514 | 0.2857 | 0.2458 | 4.90 | 4.61 | 4.61 | 5.00 |
| MedQA-3 | 0.2953 | 0.2823 | 0.2887 | 0.2763 | 4.78 | 4.73 | 4.73 | 4.94 |
| MedQA-4 | 0.2901 | 0.2416 | 0.2798 | 0.2339 | 4.92 | 4.59 | 4.57 | 5.00 |
| MedQA-5 | 0.2990 | 0.2843 | 0.2970 | 0.2818 | 4.82 | 4.67 | 4.71 | 4.94 |
| UR-IW-5 | 0.3355 | 0.1910 | 0.3417 | 0.1913 | 4.94 | 4.76 | 4.04 | 4.94 |
| UR-IW-4 | 0.2150 | 0.2377 | 0.2057 | 0.2282 | 4.92 | 4.57 | 4.84 | 4.96 |
| UR-IW-3 | 0.2033 | 0.2179 | 0.2007 | 0.2140 | 5.00 | 4.43 | 4.65 | 4.96 |
| UR-IW-2 | 0.3335 | 0.1870 | 0.3386 | 0.1890 | 4.94 | 4.78 | 4.02 | 4.88 |
| UR-IW-1 | 0.2123 | 0.1959 | 0.2258 | 0.2037 | 4.90 | 4.65 | 4.39 | 4.98 |
| health-nlp-1 | 0.0319 | 0.0369 | 0.0324 | 0.0380 | 1.24 | 1.04 | 1.22 | 1.37 |
| health-nlp-2 | 0.0167 | 0.0214 | 0.0180 | 0.0229 | 1.24 | 0.82 | 1.06 | 1.29 |
| dictycite-baseline | 0.3226 | 0.2568 | 0.3148 | 0.2503 | 4.90 | 4.55 | 4.51 | 4.78 |
| health-nlp-4 | 0.0247 | 0.0225 | 0.0287 | 0.0260 | 1.33 | 0.96 | 1.20 | 1.33 |
| dictycite-max-rew-sl | 0.3009 | 0.3088 | 0.2866 | 0.2950 | 4.98 | 4.75 | 4.82 | 4.98 |
| dictycite-snippet | 0.3253 | 0.2592 | 0.3166 | 0.2516 | 4.90 | 4.59 | 4.47 | 4.80 |
| h-nlp-autob-medcpt | 0.0291 | 0.0362 | 0.0302 | 0.0382 | 1.33 | 0.98 | 1.25 | 1.37 |
| health-nlp-3 | 0.0051 | 0.0074 | 0.0058 | 0.0088 | 1.00 | 0.63 | 0.84 | 1.24 |
| bioinfo-0 | 0.2701 | 0.2208 | 0.2684 | 0.2170 | 4.92 | 4.57 | 4.33 | 5.00 |
| bioinfo-1 | 0.3182 | 0.2410 | 0.3112 | 0.2341 | 4.96 | 4.76 | 4.37 | 4.96 |
| bioinfo-2 | 0.3121 | 0.2388 | 0.3113 | 0.2349 | 4.98 | 4.67 | 4.45 | 4.94 |
| bioinfo-3 | 0.3146 | 0.2145 | 0.3120 | 0.2089 | 4.98 | 4.78 | 4.24 | 4.90 |
| bioinfo-4 | 0.3036 | 0.2191 | 0.3051 | 0.2170 | 4.86 | 4.71 | 4.22 | 4.92 |
| pancras_naive | 0.2764 | 0.2001 | 0.2842 | 0.2034 | 4.86 | 4.80 | 4.43 | 4.82 |
| pancras_crag | 0.2764 | 0.2001 | 0.2842 | 0.2034 | 4.86 | 4.80 | 4.43 | 4.82 |
| lean_rag | 0.2673 | 0.2749 | 0.2515 | 0.2591 | 4.86 | 4.53 | 4.61 | 4.84 |
| lean_rag_ft | 0.2681 | 0.2676 | 0.2569 | 0.2564 | 4.92 | 4.47 | 4.59 | 4.96 |
| lean_rag_ft_sparse | 0.2536 | 0.2279 | 0.2509 | 0.2206 | 4.73 | 4.51 | 4.55 | 4.80 |
| multi-stage rank&llm | 0.3579 | 0.2175 | 0.3584 | 0.2154 | 4.86 | 4.69 | 4.14 | 4.78 |
| dmiip2024 | 0.2099 | 0.2672 | 0.1939 | 0.2487 | 4.92 | 3.86 | 4.67 | 4.98 |
| dmiip2024_1 | 0.2194 | 0.2509 | 0.2092 | 0.2415 | 4.92 | 4.45 | 4.75 | 5.00 |
| dmiip2024_2 | 0.2563 | 0.2857 | 0.2424 | 0.2712 | 4.92 | 4.39 | 4.73 | 4.96 |
| dmiip2024_3 | 0.2519 | 0.2862 | 0.2417 | 0.2774 | 4.94 | 4.49 | 4.84 | 4.98 |
| dmiip2024_4 | 0.2438 | 0.2842 | 0.2338 | 0.2742 | 4.92 | 4.27 | 4.75 | 4.96 |
| CSA-IISR 1st | 0.2814 | 0.2510 | 0.2787 | 0.2479 | 4.80 | 4.71 | 4.73 | 4.92 |
| CSA-IISR 2nd | 0.1800 | 0.1630 | 0.1771 | 0.1590 | 3.39 | 3.29 | 3.35 | 3.55 |
| CSA-IISR 3rd | 0.1835 | 0.1653 | 0.1815 | 0.1625 | 3.37 | 3.25 | 3.39 | 3.53 |
| CSA-IISR 4th | 0.1296 | 0.1057 | 0.1252 | 0.1008 | 2.02 | 2.06 | 2.00 | 2.16 |
| CSA-IISR 5st | 0.1814 | 0.1636 | 0.1764 | 0.1587 | 3.39 | 3.27 | 3.31 | 3.53 |
| IR_J-1 | - | - | - | - | 1.61 | 0.49 | 1.61 | 1.61 |
| IR_J-2 | 0.2487 | 0.2037 | 0.2402 | 0.1956 | 4.88 | 4.80 | 4.35 | 4.84 |
| IR_J-3 | 0.2404 | 0.1918 | 0.2354 | 0.1843 | 4.92 | 4.78 | 4.31 | 4.82 |
| Organization name | 0.2752 | 0.1763 | 0.2874 | 0.1815 | 3.90 | 4.24 | 3.96 | 4.51 |
| IR_J-4 | 0.2613 | 0.2852 | 0.2487 | 0.2698 | 4.96 | 4.59 | 4.80 | 4.96 |
| IR_J-5 | - | - | - | - | 1.61 | 0.49 | 1.61 | 1.61 |
| DS@GT-BioASQ | 0.1820 | 0.2364 | 0.1677 | 0.2214 | 4.94 | 3.78 | 4.84 | 5.00 |
| Fleming-1 | 0.3549 | 0.1772 | 0.3541 | 0.1757 | 4.82 | 4.69 | 4.04 | 4.76 |
| LLM Biomedical QA | 0.0663 | 0.0577 | 0.0676 | 0.0588 | 1.31 | 1.12 | 1.06 | 1.33 |
| DMIS_MES_TEST_1 | 0.1649 | 0.1027 | 0.1685 | 0.1010 | 2.29 | 2.61 | 2.12 | 2.35 |
| DMIS_MES_TEST_2 | 0.1649 | 0.1027 | 0.1685 | 0.1010 | 2.29 | 2.61 | 2.12 | 2.35 |
| DMIS_MES_TEST_3 | 0.1649 | 0.1027 | 0.1685 | 0.1010 | 2.29 | 2.61 | 2.12 | 2.35 |
| DMIS_MES_TEST_4 | 0.1649 | 0.1027 | 0.1685 | 0.1010 | 2.29 | 2.61 | 2.12 | 2.35 |
| DMIS_MES_TEST_5 | 0.1649 | 0.1027 | 0.1685 | 0.1010 | 2.29 | 2.61 | 2.12 | 2.35 |
| Gen-Doc | 0.0627 | 0.0575 | 0.0626 | 0.0574 | 1.25 | 1.18 | 1.20 | 1.27 |
| ku_dmis | - | - | - | - | - | - | - | - |
| ku_dmis_2 | - | - | - | - | - | - | - | - |
| ku_dmis_3 | - | - | - | - | - | - | - | - |
| ku_dmis_4 | - | - | - | - | - | - | - | - |
| ku_dmis_5 | - | - | - | - | - | - | - | - |
| llama for 14b b | 0.1833 | 0.2209 | 0.1707 | 0.2092 | 4.37 | 3.80 | 4.33 | 4.49 |
| agentic graph | 0.1052 | 0.1125 | 0.1004 | 0.1079 | 3.41 | 3.57 | 4.00 | 4.59 |
| EP-1 | 0.2460 | 0.2194 | 0.2545 | 0.2262 | 4.98 | 4.75 | 4.82 | 4.98 |
| EP-2 | 0.2721 | 0.2410 | 0.2731 | 0.2422 | 4.98 | 4.75 | 4.84 | 5.00 |
| EP-3 | 0.2713 | 0.2453 | 0.2706 | 0.2447 | 4.96 | 4.69 | 4.78 | 5.00 |
| EP-4 | 0.2410 | 0.2140 | 0.2505 | 0.2210 | 5.00 | 4.75 | 4.78 | 4.96 |
| IR_Y-1 | 0.0777 | 0.0984 | 0.0774 | 0.0984 | 3.86 | 4.24 | 4.45 | 4.61 |
| IR_Y-2 | 0.1044 | 0.1154 | 0.1020 | 0.1127 | 4.00 | 4.20 | 4.41 | 4.61 |
| IR_Y-3 | 0.2589 | 0.2105 | 0.2551 | 0.2074 | 4.51 | 4.43 | 4.45 | 4.65 |
| IR_Y-4 | 0.2948 | 0.2319 | 0.2857 | 0.2235 | 4.33 | 4.47 | 4.53 | 4.84 |
| IR_Y-5 | 0.3027 | 0.2753 | 0.2978 | 0.2696 | 4.94 | 4.59 | 4.67 | 4.96 |
| Another | 0.2639 | 0.2935 | 0.2544 | 0.2844 | 4.94 | 4.65 | 4.84 | 5.00 |
| Dif-C | 0.2573 | 0.2760 | 0.2467 | 0.2662 | 4.92 | 4.35 | 4.80 | 4.94 |
| EP-5 | 0.2410 | 0.2140 | 0.2505 | 0.2210 | 5.00 | 4.75 | 4.78 | 4.96 |
| Bio26NIA | 0.2718 | 0.2935 | 0.2641 | 0.2858 | 4.96 | 4.67 | 4.86 | 4.94 |
| BioASQ_Baseline | - | - | - | - | - | - | - | - |
Test batch 4
Exact Answers
| Yes/No | Factoid | List | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| System | Accuracy | F1 Yes | F1 No | Macro F1 | Strict Acc. | Lenient Acc. | MRR | Mean Prec. | Recall | F-Measure |
| bioinfo-0 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.3636 | 0.4545 | 0.4091 | 0.3974 | 0.4403 | 0.3981 |
| bioinfo-1 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.3636 | 0.4545 | 0.4091 | 0.5414 | 0.5669 | 0.5203 |
| bioinfo-2 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.4545 | 0.5455 | 0.5000 | 0.4904 | 0.5868 | 0.5121 |
| bioinfo-3 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.6364 | 0.7273 | 0.6818 | 0.6100 | 0.6455 | 0.5944 |
| bioinfo-4 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.5455 | 0.6364 | 0.5758 | 0.4035 | 0.3948 | 0.3935 |
| pancras_naive | 0.8125 | 0.8421 | 0.7692 | 0.8057 | 0.2727 | 0.4545 | 0.3636 | 0.5705 | 0.6681 | 0.5970 |
| pancras_crag | 0.8125 | 0.8421 | 0.7692 | 0.8057 | 0.2727 | 0.4545 | 0.3636 | 0.5705 | 0.6681 | 0.5970 |
| ku_dmis | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.7273 | 0.7273 | 0.7273 | 0.7145 | 0.4465 | 0.5208 |
| ku_dmis_2 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.7273 | 0.7273 | 0.7273 | 0.6180 | 0.5501 | 0.5672 |
| ku_dmis_3 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.7273 | 0.9091 | 0.7879 | 0.5749 | 0.6456 | 0.5835 |
| ku_dmis_4 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.3636 | 0.7273 | 0.5303 | 0.6186 | 0.6038 | 0.5960 |
| ku_dmis_5 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.7273 | 0.9091 | 0.7879 | 0.5312 | 0.7241 | 0.5843 |
| EP-1 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.5455 | 0.5455 | 0.5455 | 0.6067 | 0.5042 | 0.5291 |
| EP-2 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.7273 | 0.7273 | 0.7273 | 0.6138 | 0.5092 | 0.5343 |
| EP-3 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.6364 | 0.7273 | 0.6818 | 0.5913 | 0.6252 | 0.5794 |
| EP-4 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.2727 | 0.7273 | 0.4773 | 0.5800 | 0.4519 | 0.4927 |
| EP-5 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.2727 | 0.7273 | 0.4545 | 0.6000 | 0.4653 | 0.5087 |
| "RMC_1" | 0.7500 | 0.8000 | 0.6667 | 0.7333 | 0.4545 | 0.4545 | 0.4545 | 0.4150 | 0.3081 | 0.3404 |
| RMC_2 | 0.8750 | 0.8889 | 0.8571 | 0.8730 | 0.5455 | 0.5455 | 0.5455 | 0.5800 | 0.4728 | 0.5014 |
| UR-IW-1 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.4545 | 0.5455 | 0.4848 | 0.4628 | 0.6593 | 0.5149 |
| UR-IW-2 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.5455 | 0.6364 | 0.5758 | 0.3620 | 0.7850 | 0.4608 |
| UR-IW-3 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.4545 | 0.5455 | 0.4773 | 0.4942 | 0.7265 | 0.5564 |
| UR-IW-4 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.4545 | 0.6364 | 0.5303 | 0.5214 | 0.6843 | 0.5554 |
| multi-stage rank&llm | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.4545 | 0.6364 | 0.5076 | 0.4943 | 0.6625 | 0.5506 |
| SATO | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.6364 | 0.6364 | 0.6364 | 0.6625 | 0.5322 | 0.5783 |
| UR-IW-5 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.5455 | 0.6364 | 0.5682 | 0.3144 | 0.7740 | 0.4228 |
| dictycite-baseline | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.4545 | 0.5455 | 0.5000 | 0.6283 | 0.5572 | 0.5699 |
| dictycite-max-rew-sl | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.6364 | 0.8182 | 0.7273 | 0.6226 | 0.6789 | 0.6281 |
| dictycite-snippet | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.4545 | 0.5455 | 0.5000 | 0.6308 | 0.5697 | 0.5828 |
| Finalcorrected | 0.8125 | 0.8421 | 0.7692 | 0.8057 | 0.5455 | 0.5455 | 0.5455 | 0.3240 | 0.6428 | 0.4108 |
| MedQA-1 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.4545 | 0.5455 | 0.5000 | 0.4432 | 0.5339 | 0.4611 |
| MedQA-2 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.3636 | 0.4545 | 0.4091 | 0.4109 | 0.5359 | 0.4396 |
| MedQA-3 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.4545 | 0.5455 | 0.5000 | 0.4964 | 0.6180 | 0.5262 |
| MedQA-4 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.4545 | 0.5455 | 0.5000 | 0.5194 | 0.5992 | 0.5349 |
| MedQA-5 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.4545 | 0.5455 | 0.5000 | 0.4627 | 0.6335 | 0.5069 |
| health-nlp-1 | 0.8125 | 0.8421 | 0.7692 | 0.8057 | 0.1818 | 0.1818 | 0.1818 | 0.2950 | 0.1712 | 0.1941 |
| health-nlp-2 | 0.6875 | 0.8000 | 0.2857 | 0.5429 | 0.3636 | 0.3636 | 0.3636 | 0.1489 | 0.1418 | 0.1349 |
| health-nlp-4 | 0.7500 | 0.8182 | 0.6000 | 0.7091 | 0.3636 | 0.3636 | 0.3636 | 0.2592 | 0.1384 | 0.1713 |
| h-nlp-autob-medcpt | 0.8125 | 0.8571 | 0.7273 | 0.7922 | 0.3636 | 0.3636 | 0.3636 | 0.4436 | 0.2908 | 0.3260 |
| health-nlp-3 | 0.7500 | 0.8182 | 0.6000 | 0.7091 | 0.0909 | 0.0909 | 0.0909 | 0.2033 | 0.1093 | 0.1284 |
| multi-stage rank&ll | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.4545 | 0.5455 | 0.5000 | 0.4328 | 0.6598 | 0.5012 |
| Fleming-1 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.3636 | 0.5455 | 0.4167 | 0.6007 | 0.5923 | 0.5897 |
| lean_rag | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.3636 | 0.3636 | 0.3636 | 0.6298 | 0.4771 | 0.5086 |
| lean_rag_ft_sparse | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.2727 | 0.2727 | 0.2727 | 0.5493 | 0.4101 | 0.4486 |
| dmiip2024 | 0.6250 | 0.7500 | 0.2500 | 0.5000 | 0.4545 | 0.5455 | 0.5000 | 0.6495 | 0.6360 | 0.6206 |
| dmiip2024_1 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.5455 | 0.7273 | 0.6364 | 0.6704 | 0.5204 | 0.5674 |
| dmiip2024_2 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.5455 | 0.7273 | 0.6212 | 0.5250 | 0.6010 | 0.5377 |
| dmiip2024_3 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.4545 | 0.5455 | 0.5000 | 0.5793 | 0.6008 | 0.5697 |
| dmiip2024_4 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.5455 | 0.8182 | 0.6818 | 0.6975 | 0.5280 | 0.5764 |
| DS@GT-BioASQ | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.3636 | 0.4545 | 0.4091 | 0.4458 | 0.2372 | 0.2993 |
| DSGTBioasq | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.3636 | 0.4545 | 0.4091 | 0.4458 | 0.2372 | 0.2993 |
| 1 system | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.5455 | 0.6364 | 0.5909 | 0.5338 | 0.5142 | 0.4953 |
| 2 system | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.4545 | 0.6364 | 0.5303 | 0.4081 | 0.6449 | 0.4600 |
| 3 system | 0.8125 | 0.8421 | 0.7692 | 0.8057 | 0.3636 | 0.6364 | 0.4848 | 0.3699 | 0.6089 | 0.4331 |
| 4 system | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.3636 | 0.5455 | 0.4545 | 0.5140 | 0.5770 | 0.5204 |
| 5 system | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.4545 | 0.4545 | 0.4545 | 0.4873 | 0.6466 | 0.5077 |
| IR_J-1 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.4545 | 0.6364 | 0.5303 | 0.6615 | 0.7609 | 0.6899 |
| IR_J-2 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.3636 | 0.4545 | 0.4091 | 0.4337 | 0.5456 | 0.4671 |
| IR_J-3 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.4545 | 0.4545 | 0.4545 | 0.6735 | 0.6554 | 0.6559 |
| IR_J-4 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.4545 | 0.4545 | 0.4545 | 0.5861 | 0.5993 | 0.5669 |
| IR_J-5 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.3636 | 0.3636 | 0.3636 | 0.6918 | 0.5868 | 0.6199 |
| LLM Biomedical QA | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.3636 | 0.5455 | 0.4242 | 0.5938 | 0.5780 | 0.5653 |
| Fleming-2 | 0.9375 | 0.9524 | 0.9091 | 0.9307 | 0.3636 | 0.5455 | 0.4167 | 0.6007 | 0.5923 | 0.5897 |
| IR_Y-1 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.1818 | 0.2727 | 0.2121 | 0.3893 | 0.4327 | 0.3912 |
| IR_Y-2 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 0.1818 | 0.2727 | 0.2045 | 0.3497 | 0.4055 | 0.3608 |
| IR_Y-3 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.4545 | 0.5455 | 0.5000 | 0.2261 | 0.1901 | 0.1844 |
| agentic graph | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.2727 | 0.2727 | 0.2727 | 0.3719 | 0.4028 | 0.3717 |
| IR_Y-4 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.3636 | 0.4545 | 0.4091 | 0.2413 | 0.1967 | 0.1969 |
| IR_Y-5 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.4545 | 0.5455 | 0.5000 | 0.2396 | 0.1884 | 0.1911 |
| FinalQwen | 0.9375 | 0.9524 | 0.9091 | 0.9307 | - | - | - | 0.2542 | 0.1029 | 0.1326 |
| Bio26NIA | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.5455 | 0.6364 | 0.5758 | 0.6245 | 0.6181 | 0.6086 |
| Another | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.7273 | 0.8182 | 0.7727 | 0.6841 | 0.6768 | 0.6579 |
| EHM-9 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.5455 | 0.5455 | 0.5455 | 0.6356 | 0.6445 | 0.6189 |
| Dif-C | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.5455 | 0.5455 | 0.5455 | 0.6505 | 0.6277 | 0.6253 |
| NewM | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.5455 | 0.6364 | 0.5909 | 0.6288 | 0.6155 | 0.6027 |
| Fleming-3 | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.1818 | 0.5455 | 0.3333 | 0.6007 | 0.5923 | 0.5897 |
| Fleming-4 | 0.9375 | 0.9524 | 0.9091 | 0.9307 | 0.1818 | 0.5455 | 0.3333 | 0.6007 | 0.5923 | 0.5897 |
| DMIS_MES_TEST_1 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.7273 | 0.7273 | 0.7273 | - | - | - |
| DMIS_MES_TEST_2 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.7273 | 0.7273 | 0.7273 | - | - | - |
| DMIS_MES_TEST_3 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.7273 | 0.7273 | 0.7273 | - | - | - |
| DMIS_MES_TEST_4 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.7273 | 0.7273 | 0.7273 | - | - | - |
| DMIS_MES_TEST_5 | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.7273 | 0.7273 | 0.7273 | - | - | - |
| CSA-IISR 1st | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.5455 | 0.8182 | 0.6667 | 0.6918 | 0.7092 | 0.6883 |
| CSA-IISR 2nd | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.6364 | 0.7273 | 0.6818 | 0.6918 | 0.7092 | 0.6883 |
| CSA-IISR 3rd | 0.8750 | 0.9000 | 0.8333 | 0.8667 | 0.6364 | 0.8182 | 0.7045 | 0.6918 | 0.7092 | 0.6883 |
| CSA-IISR 4th | 0.8750 | 0.8889 | 0.8571 | 0.8730 | 0.5455 | 0.9091 | 0.6970 | 0.6922 | 0.7524 | 0.7097 |
| CSA-IISR 5st | 0.9375 | 0.9474 | 0.9231 | 0.9352 | 0.6364 | 0.7273 | 0.6818 | 0.6922 | 0.7524 | 0.7097 |
| BioASQ_Baseline | 0.3750 | 0.1667 | 0.5000 | 0.3333 | 0.0000 | 0.1818 | 0.0758 | 0.2584 | 0.2772 | 0.2223 |
Ideal Answers
| Automatic scores (Rouge - R) | Manual scores | |||||||
|---|---|---|---|---|---|---|---|---|
| System | R-2 (Rec) | R-2 (F1) | R-SU4 (Rec) | R-SU4 (F1) | Readability | Recall | Precision | Repetition |
| bioinfo-0 | 0.2633 | 0.2211 | 0.2607 | 0.2171 | 4.78 | 4.60 | 4.41 | 4.95 |
| bioinfo-1 | 0.2871 | 0.2070 | 0.2870 | 0.2050 | 4.84 | 4.74 | 4.24 | 4.98 |
| bioinfo-2 | 0.3024 | 0.2264 | 0.3059 | 0.2260 | 4.84 | 4.83 | 4.41 | 4.95 |
| bioinfo-3 | 0.2736 | 0.1998 | 0.2794 | 0.2006 | 4.81 | 4.88 | 4.22 | 4.95 |
| bioinfo-4 | 0.2755 | 0.2033 | 0.2737 | 0.1992 | 4.76 | 4.71 | 4.29 | 4.93 |
| pancras_naive | 0.2666 | 0.1873 | 0.2790 | 0.1931 | 4.74 | 4.83 | 4.31 | 4.79 |
| pancras_crag | 0.2666 | 0.1873 | 0.2790 | 0.1931 | 4.74 | 4.83 | 4.31 | 4.79 |
| ku_dmis | - | - | - | - | - | - | - | - |
| ku_dmis_2 | - | - | - | - | - | - | - | - |
| ku_dmis_3 | - | - | - | - | - | - | - | - |
| ku_dmis_4 | - | - | - | - | - | - | - | - |
| ku_dmis_5 | - | - | - | - | - | - | - | - |
| EP-1 | 0.2292 | 0.2065 | 0.2293 | 0.2067 | 4.84 | 4.66 | 4.81 | 5.00 |
| EP-2 | 0.2419 | 0.2199 | 0.2438 | 0.2209 | 4.90 | 4.60 | 4.78 | 4.98 |
| EP-3 | 0.2566 | 0.2291 | 0.2601 | 0.2309 | 4.86 | 4.59 | 4.79 | 4.97 |
| EP-4 | 0.2478 | 0.2294 | 0.2479 | 0.2276 | 4.81 | 4.60 | 4.69 | 4.98 |
| EP-5 | 0.2292 | 0.2065 | 0.2293 | 0.2067 | 4.84 | 4.66 | 4.81 | 5.00 |
| "RMC_1" | 0.1787 | 0.2194 | 0.1673 | 0.2061 | 4.78 | 3.81 | 4.52 | 4.90 |
| RMC_2 | 0.2506 | 0.2555 | 0.2450 | 0.2485 | 4.62 | 4.33 | 4.52 | 4.83 |
| UR-IW-1 | 0.2164 | 0.1936 | 0.2289 | 0.2015 | 4.83 | 4.67 | 4.45 | 4.95 |
| UR-IW-2 | 0.3095 | 0.1785 | 0.3182 | 0.1810 | 4.88 | 4.84 | 3.90 | 4.88 |
| UR-IW-3 | 0.2109 | 0.2117 | 0.2138 | 0.2140 | 4.86 | 4.59 | 4.66 | 4.97 |
| UR-IW-4 | 0.1962 | 0.2210 | 0.1965 | 0.2203 | 4.86 | 4.48 | 4.78 | 4.93 |
| multi-stage rank&llm | 0.3171 | 0.1997 | 0.3182 | 0.1986 | 4.79 | 4.71 | 4.22 | 4.79 |
| SATO | 0.1787 | 0.2039 | 0.1710 | 0.1951 | 3.31 | 3.57 | 4.43 | 4.98 |
| UR-IW-5 | 0.3015 | 0.1818 | 0.3125 | 0.1851 | 4.86 | 4.93 | 4.02 | 4.91 |
| dictycite-baseline | 0.2783 | 0.2332 | 0.2760 | 0.2300 | 4.69 | 4.48 | 4.50 | 4.74 |
| dictycite-max-rew-sl | 0.2934 | 0.2901 | 0.2895 | 0.2854 | 4.90 | 4.74 | 4.76 | 4.97 |
| dictycite-snippet | 0.2804 | 0.2358 | 0.2781 | 0.2330 | 4.72 | 4.55 | 4.55 | 4.74 |
| Finalcorrected | 0.1963 | 0.1644 | 0.1996 | 0.1675 | 4.66 | 3.93 | 4.34 | 4.90 |
| MedQA-1 | 0.2089 | 0.1879 | 0.2143 | 0.1928 | 4.55 | 4.38 | 4.33 | 4.98 |
| MedQA-2 | 0.1871 | 0.1748 | 0.1967 | 0.1849 | 4.59 | 4.38 | 4.45 | 4.88 |
| MedQA-3 | 0.2203 | 0.2063 | 0.2282 | 0.2139 | 4.59 | 4.55 | 4.47 | 4.98 |
| MedQA-4 | 0.2259 | 0.2009 | 0.2351 | 0.2085 | 4.60 | 4.55 | 4.45 | 5.00 |
| MedQA-5 | 0.2259 | 0.2009 | 0.2351 | 0.2085 | 4.60 | 4.55 | 4.45 | 5.00 |
| health-nlp-1 | 0.0240 | 0.0267 | 0.0251 | 0.0279 | 1.00 | 0.83 | 1.05 | 1.12 |
| health-nlp-2 | 0.0181 | 0.0236 | 0.0179 | 0.0239 | 0.98 | 0.84 | 1.05 | 1.09 |
| health-nlp-4 | 0.0177 | 0.0232 | 0.0172 | 0.0229 | 1.00 | 0.76 | 0.83 | 1.12 |
| h-nlp-autob-medcpt | 0.0237 | 0.0297 | 0.0223 | 0.0286 | 1.00 | 0.97 | 1.09 | 1.12 |
| health-nlp-3 | 0.0046 | 0.0077 | 0.0045 | 0.0073 | 0.78 | 0.57 | 0.90 | 1.02 |
| multi-stage rank&ll | 0.3094 | 0.1795 | 0.3089 | 0.1775 | 4.78 | 4.60 | 3.93 | 4.88 |
| Fleming-1 | 0.3173 | 0.1747 | 0.3184 | 0.1730 | 4.67 | 4.91 | 4.03 | 4.57 |
| lean_rag | 0.2191 | 0.2296 | 0.2187 | 0.2293 | 4.79 | 4.34 | 4.66 | 4.90 |
| lean_rag_ft_sparse | 0.2470 | 0.2228 | 0.2493 | 0.2235 | 4.72 | 4.53 | 4.50 | 4.83 |
| dmiip2024 | 0.2207 | 0.2605 | 0.2066 | 0.2444 | 4.90 | 4.47 | 4.74 | 4.97 |
| dmiip2024_1 | 0.2051 | 0.2451 | 0.1975 | 0.2371 | 4.90 | 4.33 | 4.88 | 5.00 |
| dmiip2024_2 | 0.2419 | 0.2590 | 0.2302 | 0.2467 | 4.81 | 4.60 | 4.67 | 4.86 |
| dmiip2024_3 | 0.2529 | 0.2835 | 0.2454 | 0.2763 | 4.88 | 4.52 | 4.81 | 5.00 |
| dmiip2024_4 | 0.2381 | 0.2701 | 0.2259 | 0.2559 | 4.91 | 4.34 | 4.74 | 4.90 |
| DS@GT-BioASQ | 0.1686 | 0.2068 | 0.1581 | 0.1954 | 4.67 | 4.00 | 4.78 | 4.93 |
| DSGTBioasq | 0.1686 | 0.2068 | 0.1581 | 0.1954 | 4.67 | 4.00 | 4.78 | 4.93 |
| 1 system | 0.1913 | 0.2238 | 0.1867 | 0.2180 | 4.86 | 4.28 | 4.69 | 5.00 |
| 2 system | 0.1937 | 0.2172 | 0.1885 | 0.2110 | 4.91 | 4.45 | 4.55 | 4.97 |
| 3 system | 0.1882 | 0.2094 | 0.1861 | 0.2071 | 4.74 | 4.43 | 4.48 | 4.88 |
| 4 system | 0.1981 | 0.2288 | 0.1942 | 0.2245 | 4.84 | 4.34 | 4.55 | 4.98 |
| 5 system | 0.1894 | 0.2181 | 0.1868 | 0.2152 | 4.84 | 4.41 | 4.59 | 4.98 |
| IR_J-1 | 0.2466 | 0.2366 | 0.2482 | 0.2364 | 4.81 | 4.59 | 4.55 | 4.91 |
| IR_J-2 | 0.1876 | 0.1643 | 0.1866 | 0.1590 | 4.83 | 4.81 | 4.09 | 4.79 |
| IR_J-3 | 0.2047 | 0.1733 | 0.2071 | 0.1700 | 4.83 | 4.78 | 4.17 | 4.78 |
| IR_J-4 | - | - | - | - | 1.64 | 0.40 | 1.64 | 1.64 |
| IR_J-5 | - | - | - | - | 1.64 | 0.40 | 1.64 | 1.64 |
| LLM Biomedical QA | 0.0477 | 0.0406 | 0.0485 | 0.0409 | 1.05 | 0.95 | 0.88 | 1.07 |
| Fleming-2 | 0.3173 | 0.1747 | 0.3184 | 0.1730 | 4.67 | 4.91 | 4.03 | 4.57 |
| IR_Y-1 | 0.0674 | 0.0791 | 0.0605 | 0.0712 | 3.62 | 4.00 | 4.38 | 4.22 |
| IR_Y-2 | 0.0686 | 0.0791 | 0.0632 | 0.0730 | 3.62 | 4.12 | 4.33 | 4.24 |
| IR_Y-3 | 0.2826 | 0.2607 | 0.2781 | 0.2562 | 4.72 | 4.43 | 4.59 | 4.93 |
| agentic graph | 0.1361 | 0.1432 | 0.1319 | 0.1395 | 3.24 | 4.02 | 4.02 | 4.28 |
| IR_Y-4 | 0.2958 | 0.2570 | 0.2923 | 0.2531 | 4.74 | 4.59 | 4.62 | 4.86 |
| IR_Y-5 | 0.2841 | 0.2656 | 0.2769 | 0.2585 | 4.88 | 4.55 | 4.69 | 4.95 |
| FinalQwen | 0.1891 | 0.1203 | 0.1954 | 0.1220 | 3.50 | 4.29 | 3.74 | 4.41 |
| Bio26NIA | 0.2877 | 0.2759 | 0.2827 | 0.2711 | 4.74 | 4.66 | 4.74 | 4.81 |
| Another | 0.2995 | 0.2761 | 0.2916 | 0.2693 | 4.88 | 4.72 | 4.67 | 4.90 |
| EHM-9 | 0.2727 | 0.2614 | 0.2668 | 0.2566 | 4.84 | 4.64 | 4.71 | 4.91 |
| Dif-C | 0.2587 | 0.2786 | 0.2523 | 0.2741 | 4.83 | 4.53 | 4.83 | 4.97 |
| NewM | 0.2453 | 0.2792 | 0.2358 | 0.2704 | 4.95 | 4.60 | 4.88 | 4.98 |
| Fleming-3 | 0.3173 | 0.1747 | 0.3184 | 0.1730 | 4.67 | 4.91 | 4.03 | 4.57 |
| Fleming-4 | 0.3173 | 0.1747 | 0.3184 | 0.1730 | 4.67 | 4.91 | 4.03 | 4.57 |
| DMIS_MES_TEST_1 | 0.1241 | 0.1108 | 0.1262 | 0.1122 | 2.03 | 2.34 | 2.33 | 2.33 |
| DMIS_MES_TEST_2 | 0.1241 | 0.1108 | 0.1262 | 0.1122 | 2.03 | 2.34 | 2.33 | 2.33 |
| DMIS_MES_TEST_3 | 0.1241 | 0.1108 | 0.1262 | 0.1122 | 2.03 | 2.34 | 2.33 | 2.33 |
| DMIS_MES_TEST_4 | 0.1241 | 0.1108 | 0.1262 | 0.1122 | 2.03 | 2.34 | 2.33 | 2.33 |
| DMIS_MES_TEST_5 | 0.1241 | 0.1108 | 0.1262 | 0.1122 | 2.03 | 2.34 | 2.33 | 2.33 |
| CSA-IISR 1st | 0.1622 | 0.1519 | 0.1646 | 0.1525 | - | - | - | - |
| CSA-IISR 2nd | 0.1650 | 0.1563 | 0.1646 | 0.1552 | 3.19 | 3.10 | 3.05 | 3.28 |
| CSA-IISR 3rd | 0.1699 | 0.1586 | 0.1713 | 0.1591 | 3.16 | 3.10 | 3.03 | 3.28 |
| CSA-IISR 4th | 0.1528 | 0.1423 | 0.1562 | 0.1453 | 3.10 | 3.07 | 3.10 | 3.29 |
| CSA-IISR 5st | 0.1586 | 0.1488 | 0.1593 | 0.1486 | - | - | - | - |
| BioASQ_Baseline | - | - | - | - | - | - | - | - |